If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 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'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 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'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 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'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 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'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 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'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 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'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ), 'gf_id' => 'HOM05D000501', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000501' ), 'data_identifier' => 'HOM05D000501', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000501', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1065', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16350' => 'bna', 'A02p06660' => 'bna', 'A02p26320' => 'bna', 'A02p37180' => 'bna', 'A03p03240' => 'bna', 'A03p16390' => 'bna', 'A03p55740' => 'bna', 'A03p55750' => 'bna', 'A05p17540' => 'bna', 'A06p15380' => 'bna', 'A06p21230' => 'bna', 'A06p39460' => 'bna', 'A09p15080' => 'bna', 'A09p59450' => 'bna', 'A09p65580' => 'bna', 'A10p29140' => 'bna', 'Aa31LG1G12130' => 'aar', 'Aa31LG2G1130' => 'aar', 'Aa31LG3G14200' => 'aar', 'Aa31LG3G18980' => 'aar', 'Aa31LG3G7550' => 'aar', 'Aa31LG4G15050' => 'aar', 'Aa31LG7G3940' => 'aar', 'Aa31LG9G10950' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2155' => 'aag', 'Actinidia07089' => 'ach', 'Actinidia08919' => 'ach', 'Actinidia10614' => 'ach', 'Actinidia18278' => 'ach', 'Actinidia18279' => 'ach', 'Actinidia25501' => 'ach', 'Actinidia28336' => 'ach', 'Actinidia28337' => 'ach', 'Actinidia28338' => 'ach', 'Actinidia30252' => 'ach', 'Actinidia39282' => 'ach', 'Actinidia39622' => 'ach', 'Ah.04g161020' => 'amhyb', 'Ah.04g161060' => 'amhyb', 'Ah.06g189730' => 'amhyb', 'Ah.08g215050' => 'amhyb', 'Ah.11g047790' => 'amhyb', 'Ah.12g052050' => 'amhyb', 'Ah.14g084730' => 'amhyb', 'AL1G19540' => 'aly', 'AL1G31810' => 'aly', 'AL2G11000' => 'aly', 'AL4G23350' => 'aly', 'AL5G24510' => 'aly', 'AL6G17690' => 'aly', 'AL6G45450' => 'aly', 'AL7G28060' => 'aly', 'AL8G19190' => 'aly', 'AL8G19900' => 'aly', 'AL8G25300' => 'aly', 'AL8G36600' => 'aly', 'Aqoxy2G00852' => 'aox', 'Aqoxy3G03696' => 'aox', 'Aqoxy5G00711' => 'aox', 'Aqoxy5G02967' => 'aox', 'Aqoxy5G04070' => 'aox', 'Aqoxy7G04137' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0IH89K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2GJ4FI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.30R83I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63T23V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6IU2DD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WSH6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L0XWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80WNUL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABT3X9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ALNG7B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BG59TV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CGS7RJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CP0U6E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CW6LLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DJ8D20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7UUKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FE7K5W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIM27N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IY723J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JLHH9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KHI48J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MBX82K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RJ2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTSP6D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NY0GHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P0P2QF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV1CJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QYC5CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRC04T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLJA11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TS4RX7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCH6AW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V7T73N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VTU1BI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W5KYCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WFS9KG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WPV7M7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YG9QF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXY0UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJGI0U' => 'arhy', 'AT1G09090' => 'ath', 'AT1G19230' => 'ath', 'AT1G64060' => 'ath', 'AT3G45810' => 'ath', 'AT4G11230' => 'ath', 'AT4G25090' => 'ath', 'AT5G07390' => 'ath', 'AT5G47910' => 'ath', 'AT5G51060' => 'ath', 'AT5G60010' => 'ath', 'ATR0582G212' => 'atr', 'ATR0594G041' => 'atr', 'ATR0681G031' => 'atr', 'ATR0691G180' => 'atr', 'ATR0730G224' => 'atr', 'ATR0743G058' => 'atr', 'Atru.chr1.4063' => 'acertr', 'Atru.chr1.4064' => 'acertr', 'Atru.chr12.1481' => 'acertr', 'Atru.chr2.23' => 'acertr', 'Atru.chr3.3776' => 'acertr', 'Atru.chr7.1758' => 'acertr', 'Atru.chr9.2101' => 'acertr', 'Atru.chr9.580' => 'acertr', 'AUR62000775' => 'cqu', 'AUR62001860' => 'cqu', 'AUR62001861' => 'cqu', 'AUR62005194' => 'cqu', 'AUR62008527' => 'cqu', 'AUR62009655' => 'cqu', 'AUR62009656' => 'cqu', 'AUR62009658' => 'cqu', 'AUR62009659' => 'cqu', 'AUR62010765' => 'cqu', 'AUR62019764' => 'cqu', 'AUR62021563' => 'cqu', 'AUR62025301' => 'cqu', 'AUR62028307' => 'cqu', 'BcaB01g01060' => 'bca', 'BcaB01g01061' => 'bca', 'BcaB01g04564' => 'bca', 'BcaB01g05689' => 'bca', 'BcaB01g05690' => 'bca', 'BcaB01g06037' => 'bca', 'BcaB03g14457' => 'bca', 'BcaB05g22602' => 'bca', 'BcaB05g23848' => 'bca', 'BcaB07g29997' => 'bca', 'BcaB07g31430' => 'bca', 'BcaB07g31939' => 'bca', 'BcaB07g32216' => 'bca', 'BcaC01g01948' => 'bca', 'BcaC01g01949' => 'bca', 'BcaC01g06067' => 'bca', 'BcaC01g06110' => 'bca', 'BcaC01g06431' => 'bca', 'BcaC03g16363' => 'bca', 'BcaC03g17620' => 'bca', 'BcaC04g22527' => 'bca', 'BcaC06g30836' => 'bca', 'BcaC06g32442' => 'bca', 'BcaC06g32838' => 'bca', 'BcaC06g32839' => 'bca', 'BcaC07g41268' => 'bca', 'BcaC07g41903' => 'bca', 'BcaC08g44190' => 'bca', 'BcaC08g44191' => 'bca', 'BcaC09g50810' => 'bca', 'BcaNung03999' => 'bca', 'BolC1t01981H' => 'bol', 'BolC2t07293H' => 'bol', 'BolC2t10212H' => 'bol', 'BolC2t11676H' => 'bol', 'BolC3t12904H' => 'bol', 'BolC3t14313H' => 'bol', 'BolC3t19278H' => 'bol', 'BolC5t30466H' => 'bol', 'BolC6t36789H' => 'bol', 'BolC7t44400H' => 'bol', 'BolC7t45887H' => 'bol', 'BolC7t45889H' => 'bol', 'BolC8t51830H' => 'bol', 'BolC8t52493H' => 'bol', 'BolC9t54716H' => 'bol', 'BolC9t59697H' => 'bol', 'BraA01t01590Z' => 'bra', 'BraA02t05748Z' => 'bra', 'BraA02t07633Z' => 'bra', 'BraA02t08704Z' => 'bra', 'BraA03t10929Z' => 'bra', 'BraA03t14641Z' => 'bra', 'BraA03t14644Z' => 'bra', 'BraA05t20648Z' => 'bra', 'BraA06t24651Z' => 'bra', 'BraA06t25212Z' => 'bra', 'BraA06t26861Z' => 'bra', 'BraA09t37151Z' => 'bra', 'BraA09t41324Z' => 'bra', 'BraA09t41902Z' => 'bra', 'BraA10t44963Z' => 'bra', 'C01p20500' => 'bna', 'C02p11950' => 'bna', 'C02p41860' => 'bna', 'C02p56200' => 'bna', 'C03p03650' => 'bna', 'C03p03670' => 'bna', 'C03p19270' => 'bna', 'C03p70430' => 'bna', 'C05p17610' => 'bna', 'C06p15970' => 'bna', 'C07p38810' => 'bna', 'C07p53970' => 'bna', 'C07p54000' => 'bna', 'C07p54030' => 'bna', 'C08p42740' => 'bna', 'C08p49570' => 'bna', 'C08p49640' => 'bna', 'C09p18200' => 'bna', 'C09p69530' => 'bna', 'CAN.G1008.37' => 'can', 'CAN.G1089.8' => 'can', 'CAN.G136.9' => 'can', 'CAN.G1459.1' => 'can', 'CAN.G210.5' => 'can', 'CAN.G394.7' => 'can', 'CAN.G394.8' => 'can', 'CAN.G532.76' => 'can', 'CAN.G84.4' => 'can', 'CANSAT01G1632' => 'cansat', 'CANSAT21G1013' => 'cansat', 'CANSAT54G0312' => 'cansat', 'CANSAT54G0352' => 'cansat', 'CANSAT54G0845' => 'cansat', 'CANSAT54G2220' => 'cansat', 'CANSAT54G2404' => 'cansat', 'CANSAT56G4229' => 'cansat', 'CANSAT80G1752' => 'cansat', 'CARHR008980' => 'chi', 'CARHR019830' => 'chi', 'CARHR046890' => 'chi', 'CARHR121970' => 'chi', 'CARHR154130' => 'chi', 'CARHR205760' => 'chi', 'CARHR232480' => 'chi', 'CARHR255350' => 'chi', 'CARHR257030' => 'chi', 'CARHR273640' => 'chi', 'CARHR284360' => 'chi', 'Carub.0001s0841' => 'cru', 'Carub.0001s1883' => 'cru', 'Carub.0002s0074' => 'cru', 'Carub.0005s1166' => 'cru', 'Carub.0006s0636' => 'cru', 'Carub.0006s3008' => 'cru', 'Carub.0007s1594' => 'cru', 'Carub.0007s1595' => 'cru', 'Carub.0008s1106' => 'cru', 'Carub.0008s2071' => 'cru', 'Carub.0014s0005' => 'cru', 'Ca_02268_v3' => 'car', 'Ca_05805_v3' => 'car', 'Ca_10126_v3' => 'car', 'Ca_10956_v3' => 'car', 'Ca_16831_v3' => 'car', 'Ca_17047_v3' => 'car', 'Ca_21776_v3' => 'car', 'Ca_26025_v3' => 'car', 'Ca_28275_v3' => 'car', 'CBR_g8794' => 'cbr', 'Cc01_g11970' => 'ccan', 'Cc01_g11980' => 'ccan', 'Cc02_g33130' => 'ccan', 'Cc04_g05580' => 'ccan', 'Cc06_g12630' => 'ccan', 'Cc08_g15360' => 'ccan', 'CDE02G1605' => 'cde', 'CDE02G3115' => 'cde', 'CDE05G0046' => 'cde', 'CDE05G0175' => 'cde', 'CDE05G0744' => 'cde', 'CDE05G0868' => 'cde', 'CDE05G0872' => 'cde', 'CDE05G1354' => 'cde', 'CDE05G1660' => 'cde', 'CDE05G2666' => 'cde', 'CDE09G0418' => 'cde', 'CDE11G1198' => 'cde', 'Cfa002947' => 'cfa', 'Cfa006622' => 'cfa', 'Cfa009476' => 'cfa', 'Cfa012255' => 'cfa', 'Cfa012541' => 'cfa', 'Cfa018686' => 'cfa', 'Cfa018875' => 'cfa', 'Cfa019331' => 'cfa', 'Ciclev10000227m.g' => 'ccl', 'Ciclev10007394m.g' => 'ccl', 'Ciclev10018741m.g' => 'ccl', 'Ciclev10024251m.g' => 'ccl', 'Ciclev10027774m.g' => 'ccl', 'Ciclev10030372m.g' => 'ccl', 'Ciclev10030649m.g' => 'ccl', 'CiPaw.03G201800' => 'cil', 'CiPaw.04G139100' => 'cil', 'CiPaw.05G097600' => 'cil', 'CiPaw.06G111600' => 'cil', 'CiPaw.07G020800' => 'cil', 'CiPaw.11G129000' => 'cil', 'CiPaw.12G088400' => 'cil', 'CiPaw.13G103100' => 'cil', 'ClCG01G002290' => 'cla', 'ClCG02G020530' => 'cla', 'ClCG02G020540' => 'cla', 'ClCG03G001820' => 'cla', 'ClCG03G017090' => 'cla', 'ClCG06G015650' => 'cla', 'ClCG07G007770' => 'cla', 'ClCG10G013100' => 'cla', 'ClCG11G000060' => 'cla', 'COL.COLO4_06861' => 'col', 'COL.COLO4_08346' => 'col', 'COL.COLO4_10511' => 'col', 'COL.COLO4_18409' => 'col', 'COL.COLO4_21217' => 'col', 'COL.COLO4_26323' => 'col', 'COL.COLO4_32939' => 'col', 'COL.COLO4_37287' => 'col', 'Cpa.g.sc13.202' => 'cpa', 'Cpa.g.sc139.10' => 'cpa', 'Cpa.g.sc201.1' => 'cpa', 'Cpa.g.sc201.3' => 'cpa', 'Cpa.g.sc201.4' => 'cpa', 'Cpa.g.sc213.2' => 'cpa', 'Cpa.g.sc2196.1' => 'cpa', 'Cpa.g.sc2279.1' => 'cpa', 'Cpa.g.sc38.53' => 'cpa', 'Cpa.g.sc48.86' => 'cpa', 'Cpa.g.sc8.321' => 'cpa', 'Cpa.g.sc82.74' => 'cpa', 'Cre03.g188300' => 'cre', 'Cre03.g188400' => 'cre', 'CsaV3_1G002910' => 'csa', 'CsaV3_1G033750' => 'csa', 'CsaV3_1G038860' => 'csa', 'CsaV3_3G043480' => 'csa', 'CsaV3_4G006160' => 'csa', 'CsaV3_5G002350' => 'csa', 'CsaV3_5G027600' => 'csa', 'CsaV3_6G021970' => 'csa', 'CsaV3_6G021980' => 'csa', 'CSS0001287' => 'camsi', 'CSS0008067' => 'camsi', 'CSS0013155' => 'camsi', 'CSS0027498' => 'camsi', 'CSS0029939' => 'camsi', 'CSS0039845' => 'camsi', 'CSS0043661' => 'camsi', 'CSS0045221' => 'camsi', 'CSS0046357' => 'camsi', 'CSS0047680' => 'camsi', 'DCAR_001945' => 'dca', 'DCAR_008349' => 'dca', 'DCAR_015578' => 'dca', 'DCAR_016325' => 'dca', 'DCAR_018859' => 'dca', 'DCAR_024774' => 'dca', 'DCAR_025625' => 'dca', 'DCAR_025626' => 'dca', 'DCAR_025628' => 'dca', 'DCAR_029394' => 'dca', 'DCAR_031538' => 'dca', 'DCAR_032290' => 'dca', 'Dinv03809' => 'din', 'Dinv06335' => 'din', 'Dinv06336' => 'din', 'Dinv13694' => 'din', 'Dinv17412' => 'din', 'Dinv23247' => 'din', 'Dinv25514' => 'din', 'Dinv37586' => 'din', 'Dinv38892' => 'din', 'Dinv40322' => 'din', 'Dinv42428' => 'din', 'Duzib041G0243' => 'dzi', 'Duzib068G0417' => 'dzi', 'Duzib084G0857' => 'dzi', 'Duzib084G1030' => 'dzi', 'Duzib093G0040' => 'dzi', 'Duzib106G0595' => 'dzi', 'Duzib106G0871' => 'dzi', 'Duzib116G0664' => 'dzi', 'Duzib150G0626' => 'dzi', 'Duzib168G0374' => 'dzi', 'Duzib168G1453' => 'dzi', 'Duzib177G0785' => 'dzi', 'Duzib187G0611' => 'dzi', 'Duzib205G1745' => 'dzi', 'Duzib205G1747' => 'dzi', 'ECA236G0243' => 'eca', 'ECA236G2070' => 'eca', 'ECA236G4419' => 'eca', 'ECA246G0752' => 'eca', 'ECA246G1480' => 'eca', 'ECA246G3126' => 'eca', 'ECA247G1659' => 'eca', 'EL10Ac2g03038' => 'bvu', 'EL10Ac4g09926' => 'bvu', 'EL10Ac5g11129' => 'bvu', 'EL10Ac5g12846' => 'bvu', 'EL10Ac7g15932' => 'bvu', 'EL10Ac8g18991' => 'bvu', 'EL10As2g23199' => 'bvu', 'Eucgr.C00773' => 'egr', 'Eucgr.E00785' => 'egr', 'Eucgr.F02491' => 'egr', 'Eucgr.H04514' => 'egr', 'Eucgr.J01662' => 'egr', 'Eucgr.J02107' => 'egr', 'Eucgr.L01771' => 'egr', 'FAN02G0591' => 'fan', 'FAN04G1229' => 'fan', 'FAN04G2086' => 'fan', 'FAN04G2876' => 'fan', 'FAN05G4007' => 'fan', 'FAN07G0156' => 'fan', 'FAN08G1844' => 'fan', 'FAN08G2942' => 'fan', 'FAN08G3183' => 'fan', 'FAN11G0312' => 'fan', 'FAN12G1781' => 'fan', 'FAN13G0252' => 'fan', 'FAN13G0759' => 'fan', 'FAN13G1048' => 'fan', 'FAN14G3037' => 'fan', 'FAN16G3549' => 'fan', 'FAN17G1252' => 'fan', 'FAN18G1471' => 'fan', 'FAN18G1707' => 'fan', 'FAN18G4295' => 'fan', 'FAN19G1668' => 'fan', 'FAN21G1984' => 'fan', 'FAN23G0983' => 'fan', 'FAN23G2544' => 'fan', 'FAN25G2801' => 'fan', 'FAN26G2206' => 'fan', 'FAN26G3176' => 'fan', 'FAN28G0344' => 'fan', 'FvH4_1g09270' => 'fve', 'FvH4_3g09921' => 'fve', 'FvH4_3g34420' => 'fve', 'FvH4_4g22100' => 'fve', 'FvH4_5g03310' => 'fve', 'FvH4_5g10010' => 'fve', 'FvH4_5g13850' => 'fve', 'FvH4_6g06490' => 'fve', 'Glyma.01G222700' => 'gma', 'Glyma.03G236300' => 'gma', 'Glyma.04G203200' => 'gma', 'Glyma.05G021100' => 'gma', 'Glyma.05G198700' => 'gma', 'Glyma.05G212500' => 'gma', 'Glyma.06G162300' => 'gma', 'Glyma.07G130800' => 'gma', 'Glyma.08G005900' => 'gma', 'Glyma.08G018900' => 'gma', 'Glyma.09G073200' => 'gma', 'Glyma.10G152200' => 'gma', 'Glyma.11G020700' => 'gma', 'Glyma.15G182000' => 'gma', 'Glyma.17G078300' => 'gma', 'Glyma.19G233900' => 'gma', 'Glyma.20G236200' => 'gma', 'Gohir.A01G115900' => 'ghi', 'Gohir.A02G104800' => 'ghi', 'Gohir.A03G055250' => 'ghi', 'Gohir.A05G194400' => 'ghi', 'Gohir.A05G259500' => 'ghi', 'Gohir.A07G016800' => 'ghi', 'Gohir.A07G045800' => 'ghi', 'Gohir.A07G094300' => 'ghi', 'Gohir.A11G267300' => 'ghi', 'Gohir.A12G182600' => 'ghi', 'Gohir.A12G195200' => 'ghi', 'Gohir.A12G233100' => 'ghi', 'Gohir.D01G104200' => 'ghi', 'Gohir.D03G079000' => 'ghi', 'Gohir.D03G111400' => 'ghi', 'Gohir.D05G197600' => 'ghi', 'Gohir.D05G261500' => 'ghi', 'Gohir.D07G016600' => 'ghi', 'Gohir.D07G050200' => 'ghi', 'Gohir.D07G098800' => 'ghi', 'Gohir.D08G134200' => 'ghi', 'Gohir.D11G277300' => 'ghi', 'Gohir.D12G185700' => 'ghi', 'Gohir.D12G197600' => 'ghi', 'Gohir.D12G234200' => 'ghi', 'Gorai.001G017400' => 'gra', 'Gorai.001G053300' => 'gra', 'Gorai.001G106500' => 'gra', 'Gorai.002G128200' => 'gra', 'Gorai.003G085100' => 'gra', 'Gorai.003G117900' => 'gra', 'Gorai.004G137300' => 'gra', 'Gorai.007G299500' => 'gra', 'Gorai.008G199100' => 'gra', 'Gorai.008G212100' => 'gra', 'Gorai.008G250500' => 'gra', 'Gorai.009G202500' => 'gra', 'Gorai.009G273400' => 'gra', 'GSVIVG01001122001' => 'vvi', 'GSVIVG01001123001' => 'vvi', 'GSVIVG01004751001' => 'vvi', 'GSVIVG01014350001' => 'vvi', 'GSVIVG01015025001' => 'vvi', 'GSVIVG01019429001' => 'vvi', 'GSVIVG01025074001' => 'vvi', 'GSVIVG01031128001' => 'vvi', 'GSVIVG01031791001' => 'vvi', 'HanXRQChr02g0034441' => 'han', 'HanXRQChr04g0125801' => 'han', 'HanXRQChr05g0133941' => 'han', 'HanXRQChr05g0155821' => 'han', 'HanXRQChr05g0155831' => 'han', 'HanXRQChr06g0166241' => 'han', 'HanXRQChr06g0176071' => 'han', 'HanXRQChr06g0178241' => 'han', 'HanXRQChr08g0228941' => 'han', 'HanXRQChr08g0228951' => 'han', 'HanXRQChr08g0228981' => 'han', 'HanXRQChr08g0229011' => 'han', 'HanXRQChr10g0315961' => 'han', 'HanXRQChr17g0533891' => 'han', 'Haze_04147' => 'cav', 'Haze_04148' => 'cav', 'Haze_07071' => 'cav', 'Haze_07722' => 'cav', 'Haze_08119' => 'cav', 'Haze_08194' => 'cav', 'Haze_08204' => 'cav', 'Haze_08205' => 'cav', 'Haze_08743' => 'cav', 'Haze_12533' => 'cav', 'Haze_23984' => 'cav', 'Haze_26059' => 'cav', 'Hma1.2p1_0179F.1_g079230' => 'hma', 'Hma1.2p1_0216F.1_g091160' => 'hma', 'Hma1.2p1_0295F.1_g116740' => 'hma', 'Hma1.2p1_0746F.1_g212270' => 'hma', 'Hma1.2p1_1212F.1_g267340' => 'hma', 'HPP92_005136' => 'vpl', 'HPP92_005477' => 'vpl', 'HPP92_019349' => 'vpl', 'HPP92_019350' => 'vpl', 'HPP92_023048' => 'vpl', 'HPP92_023049' => 'vpl', 'HPP92_023050' => 'vpl', 'HPP92_023099' => 'vpl', 'Hund00944' => 'sun', 'Hund00946' => 'sun', 'Hund05023' => 'sun', 'Hund07241' => 'sun', 'Hund07242' => 'sun', 'Hund08875' => 'sun', 'Hund09911' => 'sun', 'Hund09912' => 'sun', 'Hund09913' => 'sun', 'Hund11429' => 'sun', 'Hund14259' => 'sun', 'Hund21706' => 'sun', 'Hund26095' => 'sun', 'Hund26096' => 'sun', 'Hund26098' => 'sun', 'Lalb_Chr03g0042141' => 'lal', 'Lalb_Chr05g0224431' => 'lal', 'Lalb_Chr07g0183931' => 'lal', 'Lalb_Chr11g0074021' => 'lal', 'Lalb_Chr12g0202671' => 'lal', 'Lalb_Chr12g0202681' => 'lal', 'Lalb_Chr13g0302871' => 'lal', 'Lalb_Chr15g0077321' => 'lal', 'Lalb_Chr23g0272831' => 'lal', 'Lj1A179T60' => 'lonja', 'Lj1g0001738' => 'lja', 'Lj1g0003996' => 'lja', 'Lj1g0005887' => 'lja', 'Lj1g0027384' => 'lja', 'Lj2A1045T50' => 'lonja', 'Lj2A176G38' => 'lonja', 'Lj4A919T44' => 'lonja', 'Lj4g0012002' => 'lja', 'Lj4g0012492' => 'lja', 'Lj4g0019193' => 'lja', 'Lj5A85T106' => 'lonja', 'Lj5g0013986' => 'lja', 'Lj5g0018059' => 'lja', 'Lj6A796T82' => 'lonja', 'Lj6g0016175' => 'lja', 'Lj9A489T66' => 'lonja', 'LjContig00312_ERROPOS870357g0020670' => 'lja', 'Lju41A59T28' => 'lonja', 'Lsat_1_v5_gn_1_29841' => 'lsa', 'Lsat_1_v5_gn_1_30481' => 'lsa', 'Lsat_1_v5_gn_1_88341' => 'lsa', 'Lsat_1_v5_gn_1_88781' => 'lsa', 'Lsat_1_v5_gn_1_88841' => 'lsa', 'Lsat_1_v5_gn_1_89100' => 'lsa', 'Lsat_1_v5_gn_3_11620' => 'lsa', 'Lsat_1_v5_gn_5_9460' => 'lsa', 'Lsat_1_v5_gn_8_76441' => 'lsa', 'Lsat_1_v5_gn_8_76500' => 'lsa', 'Lsat_1_v5_gn_8_85441' => 'lsa', 'Manes.01G051545' => 'mes', 'Manes.02G016200' => 'mes', 'Manes.04G028100' => 'mes', 'Manes.06G128700' => 'mes', 'Manes.08G057200' => 'mes', 'Manes.08G118500' => 'mes', 'Manes.09G172500' => 'mes', 'Manes.14G042600' => 'mes', 'Manes.16G092100' => 'mes', 'Mapoly0046s0097' => 'mpo', 'Mapoly0258s0001' => 'mpo', 'MBI06_g06672_MAGBIO' => 'mbi', 'MBI06_g06673_MAGBIO' => 'mbi', 'MBI06_g33541_MAGBIO' => 'mbi', 'MBI07_g42021_MAGBIO' => 'mbi', 'MBI11_g11954_MAGBIO' => 'mbi', 'MBI11_g17284_MAGBIO' => 'mbi', 'MBI11_g42055_MAGBIO' => 'mbi', 'MBI19_g20883_MAGBIO' => 'mbi', 'MBI19_g38002_MAGBIO' => 'mbi', 'MBI19_g42337_MAGBIO' => 'mbi', 'MD02G1099900' => 'mdo', 'MD03G1106300' => 'mdo', 'MD06G1093000' => 'mdo', 'MD06G1128500' => 'mdo', 'MD11G1118400' => 'mdo', 'MD12G1213800' => 'mdo', 'MD13G1134500' => 'mdo', 'MD14G1113700' => 'mdo', 'MD14G1211700' => 'mdo', 'MD15G1222800' => 'mdo', 'MD16G1145100' => 'mdo', 'Medtr1g083290' => 'mtr', 'Medtr1g113980' => 'mtr', 'Medtr2g043900' => 'mtr', 'Medtr3g098320' => 'mtr', 'Medtr3g098350' => 'mtr', 'Medtr3g098380' => 'mtr', 'Medtr4g109530' => 'mtr', 'Medtr7g060540' => 'mtr', 'Medtr7g113130' => 'mtr', 'Medtr8g095520' => 'mtr', 'Medtr8g099030' => 'mtr', 'MELO3C000378.2' => 'cme', 'MELO3C005719.2' => 'cme', 'MELO3C015312.2' => 'cme', 'MELO3C016333.2' => 'cme', 'MELO3C020689.2' => 'cme', 'MELO3C022917.2' => 'cme', 'MELO3C025712.2' => 'cme', 'MELO3C025713.2' => 'cme', 'MELO3C026754.2' => 'cme', 'MELO3C029002.2' => 'cme', 'MELO3C029753.2' => 'cme', 'MELO3C034520.2' => 'cme', 'Migut.A00712' => 'egut', 'Migut.B01146' => 'egut', 'Migut.D01163' => 'egut', 'Migut.D01166' => 'egut', 'Migut.I00652' => 'egut', 'Migut.I00653' => 'egut', 'Migut.I00678' => 'egut', 'Migut.L01592' => 'egut', 'Migut.N02642' => 'egut', 'Migut.N02643' => 'egut', 'Migut.O00661' => 'egut', 'MSTRG.11950' => 'ama', 'MSTRG.20423' => 'ama', 'MSTRG.22824' => 'ama', 'MSTRG.25637' => 'ama', 'MSTRG.4650' => 'ama', 'Nitab4.5_0000073g0390' => 'nta', 'Nitab4.5_0000182g0050' => 'nta', 'Nitab4.5_0000270g0180' => 'nta', 'Nitab4.5_0000400g0040' => 'nta', 'Nitab4.5_0000966g0080' => 'nta', 'Nitab4.5_0000976g0320' => 'nta', 'Nitab4.5_0001092g0080' => 'nta', 'Nitab4.5_0001699g0020' => 'nta', 'Nitab4.5_0002380g0120' => 'nta', 'Nitab4.5_0002443g0030' => 'nta', 'Nitab4.5_0002679g0020' => 'nta', 'Nitab4.5_0003784g0010' => 'nta', 'Nitab4.5_0005215g0040' => 'nta', 'Nitab4.5_0005215g0050' => 'nta', 'Nitab4.5_0006988g0020' => 'nta', 'Nitab4.5_0007540g0020' => 'nta', 'Nitab4.5_0007958g0020' => 'nta', 'Nitab4.5_0009037g0050' => 'nta', 'Nitab4.5_0009037g0070' => 'nta', 'Nitab4.5_0012300g0010' => 'nta', 'Nn1g00099' => 'nnu', 'Nn1g00211' => 'nnu', 'Nn1g01332' => 'nnu', 'Nn1g01700' => 'nnu', 'Nn1g03322' => 'nnu', 'Nn1g09669' => 'nnu', 'Nn2g10573' => 'nnu', 'Nn2g11060' => 'nnu', 'Nn2g12335' => 'nnu', 'Nn2g12336' => 'nnu', 'Nn3g16197' => 'nnu', 'Nn3g17447' => 'nnu', 'Nn3g19827' => 'nnu', 'Nn3g19898' => 'nnu', 'Nn3g21429' => 'nnu', 'Nn3g21899' => 'nnu', 'Nn4g22063' => 'nnu', 'Nn4g24535' => 'nnu', 'Nn6g32297' => 'nnu', 'Nn6g35642' => 'nnu', 'Nn7g37301' => 'nnu', 'Nn7g37584' => 'nnu', 'Nn7g37585' => 'nnu', 'Nn8g38546' => 'nnu', 'Nn8g38547' => 'nnu', 'Oeu010010.1' => 'oeu', 'Oeu012861.1' => 'oeu', 'Oeu019821.1' => 'oeu', 'Oeu028115.1' => 'oeu', 'Oeu036711.4' => 'oeu', 'Oeu059574.2' => 'oeu', 'Oeu062283.1' => 'oeu', 'Os01g0360200' => 'osa', 'Os01g0734200' => 'osa', 'Os01g0835500' => 'osa', 'Os05g0465800' => 'osa', 'Os05g0528000' => 'osa', 'Os08g0453700' => 'osa', 'Os09g0438000' => 'osa', 'Os11g0537400' => 'osa', 'Os12g0541300' => 'osa', 'Peaxi162Scf00037g01033' => 'pax', 'Peaxi162Scf00072g00022' => 'pax', 'Peaxi162Scf00074g01630' => 'pax', 'Peaxi162Scf00191g01020' => 'pax', 'Peaxi162Scf00207g00236' => 'pax', 'Peaxi162Scf00289g00112' => 'pax', 'Peaxi162Scf00314g00752' => 'pax', 'Peaxi162Scf00314g00838' => 'pax', 'Peaxi162Scf00418g00114' => 'pax', 'Peaxi162Scf00836g00220' => 'pax', 'Peaxi162Scf00928g00239' => 'pax', 'PGR042G1034' => 'pgr', 'PGR083G2679' => 'pgr', 'PGR102G1275' => 'pgr', 'PGR119G1507' => 'pgr', 'PGR119G1775' => 'pgr', 'PGR119G2230' => 'pgr', 'PGR142G2393' => 'pgr', 'PGSC0003DMG400012316' => 'stu', 'PGSC0003DMG400013550' => 'stu', 'PGSC0003DMG400014168' => 'stu', 'PGSC0003DMG400015543' => 'stu', 'PGSC0003DMG400024754' => 'stu', 'PGSC0003DMG400025701' => 'stu', 'PGSC0003DMG400030390' => 'stu', 'Phvul.002G160700' => 'pvu', 'Phvul.002G279700' => 'pvu', 'Phvul.002G293700' => 'pvu', 'Phvul.003G106301' => 'pvu', 'Phvul.003G184900' => 'pvu', 'Phvul.006G090200' => 'pvu', 'Phvul.007G196800' => 'pvu', 'Phvul.008G100700' => 'pvu', 'Phvul.009G159200' => 'pvu', 'Phvul.009G224100' => 'pvu', 'Potri.001G070900' => 'ptr', 'Potri.001G098300' => 'ptr', 'Potri.003G133300' => 'ptr', 'Potri.003G159800' => 'ptr', 'Potri.005G026200' => 'ptr', 'Potri.006G097200' => 'ptr', 'Potri.006G137300' => 'ptr', 'Potri.012G111600' => 'ptr', 'Potri.015G109800' => 'ptr', 'Potri.016G112200' => 'ptr', 'Pp3c10_24760' => 'ppa', 'Pp3c19_18750' => 'ppa', 'Pp3c20_22940' => 'ppa', 'Pp3c23_10130' => 'ppa', 'Pp3c24_2840' => 'ppa', 'Prupe.1G211000' => 'ppe', 'Prupe.5G107400' => 'ppe', 'Prupe.5G138300' => 'ppe', 'Prupe.5G204900' => 'ppe', 'Prupe.6G088800' => 'ppe', 'Prupe.6G321500' => 'ppe', 'Prupe.7G193000' => 'ppe', 'Psat0s3618g0160' => 'psa', 'Psat0s5170g0040' => 'psa', 'Psat0s7081g0040' => 'psa', 'Psat1g135640' => 'psa', 'Psat1g135680' => 'psa', 'Psat2g183960' => 'psa', 'Psat3g011120' => 'psa', 'Psat3g140480' => 'psa', 'Psat5g055920' => 'psa', 'Psat6g151240' => 'psa', 'Psat7g029200' => 'psa', 'Psat7g040320' => 'psa', 'Psat7g060280' => 'psa', 'Psat7g062480' => 'psa', 'Psat7g062640' => 'psa', 'Psat7g065320' => 'psa', 'PSO017G4022' => 'pso', 'PSO017G7242' => 'pso', 'PSO063G6995' => 'pso', 'PSO170G0027' => 'pso', 'PSO170G3984' => 'pso', 'PSO170G6102' => 'pso', 'PSO210G3816' => 'pso', 'PSO210G6694' => 'pso', 'PSO210G7060' => 'pso', 'PSO223G0086' => 'pso', 'PSO339G2667' => 'pso', 'PSO339G6326' => 'pso', 'PSO384G4876' => 'pso', 'PSO386G0264' => 'pso', 'PSO478G4282' => 'pso', 'QL01p035191' => 'qlo', 'QL02p033146' => 'qlo', 'QL03p021376' => 'qlo', 'QL03p021384' => 'qlo', 'QL03p048237' => 'qlo', 'QL10p019488' => 'qlo', 'QL10p065331' => 'qlo', 'QL11p002697' => 'qlo', 'QL11p002768' => 'qlo', 'RcHm_v2.0_Chr2g0095831' => 'rch', 'RcHm_v2.0_Chr2g0103591' => 'rch', 'RcHm_v2.0_Chr2g0103601' => 'rch', 'RcHm_v2.0_Chr2g0118871' => 'rch', 'RcHm_v2.0_Chr3g0455621' => 'rch', 'RcHm_v2.0_Chr3g0455641' => 'rch', 'RcHm_v2.0_Chr4g0428361' => 'rch', 'RcHm_v2.0_Chr5g0062021' => 'rch', 'RcHm_v2.0_Chr6g0301381' => 'rch', 'RcHm_v2.0_Chr7g0183081' => 'rch', 'RcHm_v2.0_Chr7g0188251' => 'rch', 'RcHm_v2.0_Chr7g0196471' => 'rch', 'RcHm_v2.0_Chr7g0202531' => 'rch', 'Rhsim02G0236300' => 'rsi', 'Rhsim05G0002800' => 'rsi', 'Rhsim08G0200300' => 'rsi', 'Rhsim13G0089500' => 'rsi', 'Rhsim13G0089600' => 'rsi', 'Sabra01G0049800' => 'sbr', 'Sabra01G0073600' => 'sbr', 'Sabra03G0095600' => 'sbr', 'Sabra03G0116200' => 'sbr', 'Sabra05G0031600' => 'sbr', 'Sabra06G0107400' => 'sbr', 'Sabra12G0081300' => 'sbr', 'Sabra15G0131900' => 'sbr', 'Sabra16G0108000' => 'sbr', 'SalBow1G2234' => 'sbo', 'SalBow1G2981' => 'sbo', 'SalBow3G3980' => 'sbo', 'SalBow5G4260' => 'sbo', 'SalBow5G5646' => 'sbo', 'SalBow7G2515' => 'sbo', 'Sc01g0009920' => 'sci', 'Sc09g0002990' => 'sci', 'Sc12g0001890' => 'sci', 'Sc14g0000470' => 'sci', 'Sc22g0005290' => 'sci', 'Sed0000858' => 'sed', 'Sed0002060' => 'sed', 'Sed0002736' => 'sed', 'Sed0005901' => 'sed', 'Sed0007602' => 'sed', 'Sed0008268' => 'sed', 'Sed0010050' => 'sed', 'Sed0010384' => 'sed', 'Sed0012064' => 'sed', 'Sed0012977' => 'sed', 'Sed0013363' => 'sed', 'Sed0014457' => 'sed', 'Sed0017953' => 'sed', 'Sed0019976' => 'sed', 'Sed0020437' => 'sed', 'Sed0023419' => 'sed', 'Sed0027022' => 'sed', 'SEGI_05282' => 'sgi', 'SEGI_11625' => 'sgi', 'SEGI_15347' => 'sgi', 'SEGI_16128' => 'sgi', 'SEGI_17649' => 'sgi', 'SEGI_24701' => 'sgi', 'SEGI_25567' => 'sgi', 'SEGI_27737' => 'sgi', 'SEGI_30770' => 'sgi', 'SEGI_38904' => 'sgi', 'SEGI_39507' => 'sgi', 'SEGI_41533' => 'sgi', 'SGA_v2.0_scaffold104G30110' => 'sas', 'SGA_v2.0_scaffold109G31146' => 'sas', 'SGA_v2.0_scaffold173G39129' => 'sas', 'SGA_v2.0_scaffold21G09547' => 'sas', 'SGA_v2.0_scaffold5G02815' => 'sas', 'SGA_v2.0_scaffold87G27043' => 'sas', 'SHI04095' => 'shi', 'SHI04096' => 'shi', 'SHI06926' => 'shi', 'SHI27916' => 'shi', 'SMO112G0039' => 'smo', 'SMO116G0282' => 'smo', 'SMO134G0049' => 'smo', 'SMO143G0173' => 'smo', 'SMO164G0192' => 'smo', 'SMO170G0068' => 'smo', 'SMO174G0082' => 'smo', 'SMO174G0084' => 'smo', 'SMO174G0168' => 'smo', 'SMO337G0015' => 'smo', 'SMO347G0176' => 'smo', 'SMO352G0066' => 'smo', 'SMO356G0487' => 'smo', 'SMO364G0283' => 'smo', 'SMO367G0483' => 'smo', 'Solyc01g099620.3' => 'sly', 'Solyc03g117980.3' => 'sly', 'Solyc05g025670.1' => 'sly', 'Solyc05g025680.3' => 'sly', 'Solyc06g068680.3' => 'sly', 'Solyc06g075570.2' => 'sly', 'Solyc07g042460.2' => 'sly', 'Solyc08g081690.3' => 'sly', 'Solyc11g072800.3' => 'sly', 'Sopen00g012670' => 'spe', 'Sopen01g043140' => 'spe', 'Sopen03g036880' => 'spe', 'Sopen05g021750' => 'spe', 'Sopen06g025960' => 'spe', 'Sopen06g031960' => 'spe', 'Sopen07g022100' => 'spe', 'Sopen08g029980' => 'spe', 'Sopen11g030470' => 'spe', 'Sp1g07690' => 'spa', 'Sp1g17140' => 'spa', 'Sp2g00650' => 'spa', 'Sp2g18410' => 'spa', 'Sp5g15710' => 'spa', 'Sp6g06210' => 'spa', 'Sp6g13240' => 'spa', 'Sp6g21670' => 'spa', 'Sp6g35480' => 'spa', 'Sp7g23080' => 'spa', 'TAR362G0433' => 'tar', 'TAR375G0010' => 'tar', 'TAR375G0814' => 'tar', 'TAR383G1095' => 'tar', 'TAR622G0073' => 'tar', 'TAR622G0470' => 'tar', 'TAR622G0775' => 'tar', 'TAR622G1307' => 'tar', 'TAR633G0141' => 'tar', 'THA.LOC104799470' => 'tha', 'THA.LOC104800320' => 'tha', 'THA.LOC104801411' => 'tha', 'THA.LOC104801706' => 'tha', 'THA.LOC104806425' => 'tha', 'THA.LOC104807171' => 'tha', 'THA.LOC104809360' => 'tha', 'THA.LOC104811550' => 'tha', 'THA.LOC104820812' => 'tha', 'Thecc.03G101700' => 'tca', 'Thecc.03G143500' => 'tca', 'Thecc.03G287500' => 'tca', 'Thecc.05G312200' => 'tca', 'Thecc.08G026200' => 'tca', 'Thecc.09G071200' => 'tca', 'Thecc.09G332900' => 'tca', 'Thhalv10003051m.g' => 'esa', 'Thhalv10003619m.g' => 'esa', 'Thhalv10006725m.g' => 'esa', 'Thhalv10006793m.g' => 'esa', 'Thhalv10012613m.g' => 'esa', 'Thhalv10012617m.g' => 'esa', 'Thhalv10016055m.g' => 'esa', 'Thhalv10023240m.g' => 'esa', 'Thhalv10024426m.g' => 'esa', 'Thhalv10024427m.g' => 'esa', 'Thhalv10028400m.g' => 'esa', 'TPR.G12866' => 'tpr', 'TPR.G12924' => 'tpr', 'TPR.G178' => 'tpr', 'TPR.G2037' => 'tpr', 'TPR.G23261' => 'tpr', 'TPR.G26634' => 'tpr', 'TPR.G27587' => 'tpr', 'TPR.G29195' => 'tpr', 'TPR.G31741' => 'tpr', 'TPR.G33170' => 'tpr', 'TPR.G33227' => 'tpr', 'TPR.G36017' => 'tpr', 'TPR.G39322' => 'tpr', 'TPR.G5166' => 'tpr', 'TPR.G6086' => 'tpr', 'TPR.G642' => 'tpr', 'TPR.G7784' => 'tpr', 'TPR.G7799' => 'tpr', 'TPR.G7806' => 'tpr', 'TPR.G7810' => 'tpr', 'TWI15G0637' => 'twi', 'TWI34G1241' => 'twi', 'TWI36G1245' => 'twi', 'TWI39G0016' => 'twi', 'TWI63G0687' => 'twi', 'TWI75G0262' => 'twi', 'TWI75G1101' => 'twi', 'TWI79G1611' => 'twi', 'unitig_0.g1032' => 'ugi', 'unitig_0.g1095' => 'ugi', 'unitig_21.g20338' => 'ugi', 'unitig_32.g11603' => 'ugi', 'unitig_32.g11604' => 'ugi', 'unitig_748.g8122' => 'ugi', 'vmacro03138' => 'vma', 'vmacro03139' => 'vma', 'vmacro11414' => 'vma', 'vmacro17084' => 'vma', 'vmacro19095' => 'vma', 'vmacro19297' => 'vma', 'VMungo0251G0472' => 'vmu', 'VMungo0251G0501' => 'vmu', 'VMungo0540G2074' => 'vmu', 'VMungo0720G0722' => 'vmu', 'VMungo1080G1561' => 'vmu', 'VMungo1215G2383' => 'vmu', 'VMungo1215G3181' => 'vmu', 'VMungo1309G0978' => 'vmu', 'VMungo1383G3537' => 'vmu', 'Zm00001eb023090' => 'zma', 'Zm00001eb040550' => 'zma', 'Zm00001eb113590' => 'zma', 'Zm00001eb113620' => 'zma', 'Zm00001eb113650' => 'zma', 'Zm00001eb113660' => 'zma', 'Zm00001eb131620' => 'zma', 'Zm00001eb132620' => 'zma', 'Zm00001eb148780' => 'zma', 'Zm00001eb154010' => 'zma', 'Zm00001eb197890' => 'zma', 'Zm00001eb276810' => 'zma', 'Zm00001eb293430' => 'zma', 'Zm00001eb313960' => 'zma', 'Zm00001eb341260' => 'zma', 'Zm00001eb341910' => 'zma', 'Zm00001eb410380' => 'zma' ) $gf_id = 'HOM05D000501' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000501' ) $data_identifier = 'HOM05D000501' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 12, 'amhyb' => (int) 7, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 40, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 31, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 11, 'cru' => (int) 11, 'car' => (int) 9, 'cbr' => (int) 1, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 9, 'col' => (int) 8, 'cpa' => (int) 12, 'cre' => (int) 2, 'csa' => (int) 9, 'camsi' => (int) 10, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 7, 'bvu' => (int) 7, 'egr' => (int) 7, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 17, 'ghi' => (int) 25, 'gra' => (int) 13, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 12, 'hma' => (int) 5, 'vpl' => (int) 8, 'sun' => (int) 15, 'lal' => (int) 9, 'lonja' => (int) 8, 'lja' => (int) 11, 'lsa' => (int) 11, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 11, 'cme' => (int) 12, 'egut' => (int) 11, 'ama' => (int) 5, 'nta' => (int) 20, 'nnu' => (int) 25, 'oeu' => (int) 7, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 5, 'ppe' => (int) 7, 'psa' => (int) 16, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 5, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 5, 'sed' => (int) 17, 'sgi' => (int) 12, 'sas' => (int) 6, 'shi' => (int) 4, 'smo' => (int) 15, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 10, 'tar' => (int) 9, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 20, 'twi' => (int) 8, 'ugi' => (int) 6, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410380' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1